Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14603260_14603665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14603260 - 14603665

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCTA

5'SS Class:

strong_major

3'SS Sequence:

CCGTGCTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TCCTTCTAAACA

Flanking Amino Acid:

VTVCTIMKSQGSEWRYVILS

Intron Amino Acid Position:

2722

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.8

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

70.4

0.46

0.9

61.3

40.1

Minor 5ss

28.9

-2.4

3.3

37.9

46.9

Minor BPS

63.2

0.41

1.7

70.02

42.9

Associated Gene:

Gene:

HELZ2

Ensembl Gene ID:

ENSAPLG00000010386

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035927

14582661 - 14604479

21819

ENSAPLT00000010833

14582661 - 14604479

21819