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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14686915_14688011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14686915 - 14688011

Intron Length:

1097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAC

U12 Branch Point Sequence:

CCAGTCTTACCC

Flanking Amino Acid:

EDDDEEEEGQRFYAGGSERS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

84.3

29.3

Major BPS

63.8

0.34

1.2

57.4

41.4

Major PPT

68.4

0.41

0.9

61.6

Minor 5ss

41.2

-1

45.5

Minor BPS

48.6

-0.1

1.8

53.69

44.6

Associated Gene:

Gene:

NSFL1C

Ensembl Gene ID:

ENSAPLG00000011229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023799

14685162 - 14692042

6881

ENSAPLT00000011720

14685162 - 14692108

6947