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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14688633_14689311_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14688633 - 14689311

Intron Length:

679

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTAGC

5'SS Class:

major

3'SS Sequence:

GGGACTGCTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

TGTTTGGGGACT

Flanking Amino Acid:

GERRQSSVQDVHVVLKLWKS

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

74.3

36.2

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

59.5

0.21

1.1

50.5

43.7

Minor 5ss

33.1

-1.9

2.8

41.4

38.2

Minor BPS

41.6

-0.5

2.6

67.84

43.2

Associated Gene:

Gene:

NSFL1C

Ensembl Gene ID:

ENSAPLG00000011229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023799

14685162 - 14692042

6881

ENSAPLT00000011720

14685162 - 14692108

6947