Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_1469653_1483774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1469653 - 1483774

Intron Length:

14122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAA

U12 Branch Point Sequence:

TCTCCCTCAACA

Flanking Amino Acid:

PSPTADSEIEDTTTSVRIGL

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

74.2

35.8

Major BPS

70.6

0.51

0.9

61.4

36.2

Major PPT

74.4

0.55

0.8

69.7

29.6

Minor 5ss

32.6

-2

3.1

41.2

44.8

Minor BPS

70.1

0.63

1.5

77.44

39.2

Associated Gene:

Gene:

EYA2

Ensembl Gene ID:

ENSAPLG00000009249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044559

1411509 - 1518739

107231