Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14725075_14726250_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14725075 - 14726250

Intron Length:

1176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCCAT

5'SS Class:

major

3'SS Sequence:

CGTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTGAC

U12 Branch Point Sequence:

CGGTGGGTGACG

Flanking Amino Acid:

CKGSDSSPTPRRSAKYNLCS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.2

68.8

43.8

Major BPS

45.4

-0.2

1.4

34.5

43.7

Major PPT

69.3

0.43

0.9

62.1

34.8

Minor 5ss

45.1

-0.5

64.9

46.4

Minor BPS

34.3

-1.3

2.7

38.2

45.3

Associated Gene:

Gene:

SNPH

Ensembl Gene ID:

ENSAPLG00000028758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037503

14721835 - 14726765

4931

ENSAPLT00000036402

14721835 - 14734289

12455