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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14727316_14734231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

14727316 - 14734231

Intron Length:

6916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTACCTCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTTAC

U12 Branch Point Sequence:

TTGCGTTTACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

59.1

0.23

1.2

52.7

42.9

Major PPT

76.5

0.6

0.9

69.9

36.2

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

49.9

0.07

72.68

44.6

Associated Gene:

Gene:

SNPH

Ensembl Gene ID:

ENSAPLG00000028758

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036402

14721835 - 14734289

12455