Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14754027_14754566_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14754027 - 14754566

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGCGGC

5'SS Class:

major

3'SS Sequence:

TCTCTCCGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

CGCCGCTCACCT

Flanking Amino Acid:

TGTGTGQPAGGGGSMAAPRA

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.2

55.6

43.2

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

73.6

0.53

0.9

68.9

31.5

Minor 5ss

34.9

-1.7

3.6

40.6

Minor BPS

41.2

-0.5

2.1

53.98

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034208

14735502 - 14755076

19575