Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14789112_14790082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14789112 - 14790082

Intron Length:

971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACCTTTTTATCT

Flanking Amino Acid:

WDYESHVVEWGNQDDYQLVR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

69.7

41.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.3

0.73

0.8

77.5

31.1

Minor 5ss

-1.7

2.8

37.9

39.5

Minor BPS

56.9

0.3

1.6

68.89

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020448

14789011 - 14797942

8932

ENSAPLT00000007097

14788900 - 14795507

6608