Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14791660_14792252_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14791660 - 14792252

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTGTTTCCCACA

Flanking Amino Acid:

FEHVNNTDFKQLYQTLTDYD

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

75.8

36.3

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

81.7

0.71

0.8

76.9

Minor 5ss

37.3

-1.4

3.6

55.1

49.1

Minor BPS

-0.5

2.1

59.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006783

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020448

14789011 - 14797942

8932

ENSAPLT00000007097

14788900 - 14795507

6608