Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14872099_14872839_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14872099 - 14872839

Intron Length:

741

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

GTTCCGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTTAC

U12 Branch Point Sequence:

TACCTCCTACCC

Flanking Amino Acid:

LGSLCEKLDMGESDLNKVAD

Intron Amino Acid Position:

1084

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.9

35.3

Major BPS

-0

1.3

40.9

41.1

Major PPT

76.4

0.59

0.9

69.4

36.8

Minor 5ss

31.1

-2.2

2.6

35.1

Minor BPS

46.3

-0.3

1.9

57.23

41.2

Associated Gene:

Gene:

TTI1

Ensembl Gene ID:

ENSAPLG00000002738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021150

14866389 - 14879600

13212

ENSAPLT00000002764

14871815 - 14879600

7786