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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14874611_14875447_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14874611 - 14875447

Intron Length:
837

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGTAAC

5'SS Class:
strong_major

3'SS Sequence:
CCCTCGTACGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTGAA

U12 Branch Point Sequence:
GCACTCTGAAAT

Flanking Amino Acid:
SDRSLRVRLKVLDVLELCVT

Intron Amino Acid Position:
969

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.1
1.02
0.7
86.6
22.3

Major BPS
69.8
0.49
1
61
37.5

Major PPT
66.2
0.36
0.9
60.5
34.2

Minor 5ss
30.6
-2.2
2.6
35.8
41.1

Minor BPS
48.9
0
1.5
61.38
41.6

Associated Gene:

Gene:
TTI1

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14866389 - 14879600
13212

14871815 - 14879600
7786