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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14875597_14876419_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14875597 - 14876419

Intron Length:
823

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCAGTACT

5'SS Class:
strong_major

3'SS Sequence:
TTTTGTCTTCCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
GCTTCAGTAACA

Flanking Amino Acid:
NLSDSGDEEADEVPPVAKLE

Intron Amino Acid Position:
919

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.1
0.78
1.2
84.4
33.5

Major BPS
100
1.24
0.5
100
0

Major PPT
89.2
0.88
0.7
81.2
36.5

Minor 5ss
33.8
-1.8
2.6
44.2
43

Minor BPS
52.1
0.06
2.3
69.26
42.8

Associated Gene:

Gene:
TTI1

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14866389 - 14879600
13212

14871815 - 14879600
7786