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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14879939_14881065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14879939 - 14881065

Intron Length:

1127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCGGG

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAA

U12 Branch Point Sequence:

GTAAAAGGAATC

Flanking Amino Acid:

VSVWHRELRKAKSSRKLTFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

45.2

Major BPS

58.6

0.22

1.1

59.7

34.6

Major PPT

90.7

0.92

0.6

84.9

29.9

Minor 5ss

28.9

-2.4

3.5

37.3

47.4

Minor BPS

35.8

-1.1

2.1

44.42

36.4

Associated Gene:

Gene:

RPRD1B

Ensembl Gene ID:

ENSAPLG00000002778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043001

14879788 - 14895707

15920

ENSAPLT00000002841

14879788 - 14899452

19665