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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14881196_14882268_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14881196 - 14882268

Intron Length:

1073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

AATTTTTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TACTTTTTAAAT

Flanking Amino Acid:

VLVDAFSHVAREADEGCKKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

70.2

0.45

1.1

66.4

43.3

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

67.6

0.63

1.3

77.65

38.8

Associated Gene:

Gene:

RPRD1B

Ensembl Gene ID:

ENSAPLG00000002778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043001

14879788 - 14895707

15920

ENSAPLT00000002841

14879788 - 14899452

19665