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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14882403_14889201_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14882403 - 14889201

Intron Length:

6799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAACATG

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTCTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

GTATCCAAAAGA

Flanking Amino Acid:

MEDSNSPQTKVAEEKKSLKR

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

75.1

41.1

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

77.5

0.62

73.6

41.8

Minor 5ss

42.3

-0.8

56.9

47.4

Minor BPS

46.8

-0.2

2.2

62.04

43.6

Associated Gene:

Gene:

RPRD1B

Ensembl Gene ID:

ENSAPLG00000002778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043001

14879788 - 14895707

15920

ENSAPLT00000002841

14879788 - 14899452

19665