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Intron Name: Anas_platyrhynchos_platyrhynchos_21_148854_149879_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

148854 - 149879

Intron Length:

1026

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

GTCTGCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

CCATGCCCACTC

Flanking Amino Acid:

TKSSKYSFHHRKCPTPGCDG

Intron Amino Acid Position:

683

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

71.9

34.5

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

66.9

0.38

0.9

58.2

38.5

Minor 5ss

39.7

-1.2

2.9

50.9

45.8

Minor BPS

35.1

-1.1

2.1

39.38

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014035

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014666

145170 - 162852

17683