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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14889315_14891074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14889315 - 14891074

Intron Length:

1760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTGGG

5'SS Class:

major

3'SS Sequence:

ACTTGCCTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTAGCTAACT

Flanking Amino Acid:

PQDPSAGPLLTEDLIKALQD

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

61.5

43.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.2

0.52

0.9

66.5

Minor 5ss

38.3

-1.3

3.1

45.9

44.6

Minor BPS

48.9

-0

2.5

78.85

42.7

Associated Gene:

Gene:

RPRD1B

Ensembl Gene ID:

ENSAPLG00000002778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043001

14879788 - 14895707

15920

ENSAPLT00000002841

14879788 - 14899452

19665