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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14891202_14892176_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14891202 - 14892176

Intron Length:

975

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCATGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTCCTCTAAAT

Flanking Amino Acid:

QDVSLLEKITDKEAAERLSK

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.8

31.7

Major BPS

100

1.24

0.5

100

Major PPT

81.3

0.7

0.8

29.6

Minor 5ss

39.9

-1.1

2.8

51.4

45.5

Minor BPS

56.2

0.27

1.8

76.72

Associated Gene:

Gene:

RPRD1B

Ensembl Gene ID:

ENSAPLG00000002778

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043001

14879788 - 14895707

15920

ENSAPLT00000002841

14879788 - 14899452

19665