Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14910475_14910644_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14910475 - 14910644

Intron Length:

170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTACGAGAG

5'SS Class:

major

3'SS Sequence:

CTTGCACCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAC

U12 Branch Point Sequence:

ATTTCTTGCACC

Flanking Amino Acid:

DITHNYKYPEGSEKEREVFS

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

57.1

42.4

Major BPS

57.1

0.18

1.1

Major PPT

0.43

0.9

58.9

37.3

Minor 5ss

28.3

-2.5

3.4

29.2

43.4

Minor BPS

57.9

0.23

1.9

73.52

37.3

Associated Gene:

Gene:

TGM2

Ensembl Gene ID:

ENSAPLG00000001999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002075

14907709 - 14917199

9491

ENSAPLT00000047439

14907709 - 14917631

9923