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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14915004_14916889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14915004 - 14916889

Intron Length:

1886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCTTGCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAG

U12 Branch Point Sequence:

CTGTGTTGAGCT

Flanking Amino Acid:

VDKLAFNVETGPCPVETSGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.3

35.8

Major BPS

57.3

0.18

1.6

57.1

49.4

Major PPT

72.5

0.51

68.4

37.3

Minor 5ss

28.1

-2.5

27.7

36.2

Minor BPS

45.6

-0.2

2.1

64.1

46.5

Associated Gene:

Gene:

TGM2

Ensembl Gene ID:

ENSAPLG00000001999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047439

14907709 - 14917631

9923

ENSAPLT00000002075

14907709 - 14917199

9491