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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14929195_14929381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14929195 - 14929381

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACCTGCT

5'SS Class:

major

3'SS Sequence:

CCTTTGGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

ACTTCCTCACAA

Flanking Amino Acid:

DRLPLRIGILGCMAERLKEE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.2

69.9

40.9

Major BPS

72.4

0.56

73.5

32.5

Major PPT

68.5

0.42

1.1

64.3

41.5

Minor 5ss

39.8

-1.1

3.4

59.5

44.9

Minor BPS

49.6

-0

1.9

63.35

42.7

Associated Gene:

Gene:

CDK5RAP1

Ensembl Gene ID:

ENSAPLG00000008506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025274

14929007 - 14933304

4298

ENSAPLT00000020747

14925023 - 14933133

8111

ENSAPLT00000008867

14924782 - 14933133

8352