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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14929593_14930413_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14929593 - 14930413

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TGCCTCCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

GTGTTGTGACCT

Flanking Amino Acid:

QTSAGGTTAFVSIMRGCDNM

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.1

71.8

38.2

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

69.5

0.44

65.3

36.2

Minor 5ss

-1.2

2.7

48.2

40.4

Minor BPS

44.1

-0.3

2.3

64.76

45.7

Associated Gene:

Gene:

CDK5RAP1

Ensembl Gene ID:

ENSAPLG00000008506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025274

14929007 - 14933304

4298

ENSAPLT00000020747

14925023 - 14933133

8111

ENSAPLT00000008867

14924782 - 14933133

8352