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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14931053_14931306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14931053 - 14931306

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ATGCCCATCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

GTCTCCTGAATG

Flanking Amino Acid:

SPHPKDFPDEVLQLIQERHN

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.9

1.15

0.7

89.3

28.6

Major BPS

69.6

0.49

59.5

Major PPT

66.3

0.37

0.9

59.1

36.2

Minor 5ss

-2.8

4.1

39.6

46.4

Minor BPS

64.5

0.32

1.5

65.07

42.9

Associated Gene:

Gene:

CDK5RAP1

Ensembl Gene ID:

ENSAPLG00000008506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025274

14929007 - 14933304

4298

ENSAPLT00000020747

14925023 - 14933133

8111

ENSAPLT00000008867

14924782 - 14933133

8352