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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14931573_14931688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14931573 - 14931688

Intron Length:

116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGACT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTGGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAG

U12 Branch Point Sequence:

TCTTCCTCGAGT

Flanking Amino Acid:

LVHHVRDSIPGVSLSSDFIA

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

76.1

39.5

Major BPS

60.5

0.26

1.7

69.7

44.2

Major PPT

63.5

0.3

1.2

60.1

Minor 5ss

33.5

-1.9

3.5

Minor BPS

60.2

0.4

1.9

79.38

43.1

Associated Gene:

Gene:

CDK5RAP1

Ensembl Gene ID:

ENSAPLG00000008506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025274

14929007 - 14933304

4298

ENSAPLT00000020747

14925023 - 14933133

8111

ENSAPLT00000008867

14924782 - 14933133

8352