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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14932912_14933058_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14932912 - 14933058

Intron Length:

147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACCTGC

5'SS Class:

major

3'SS Sequence:

CTGTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

TGTTCCTGAGGA

Flanking Amino Acid:

AQPGDYVLVKVTSASSQTLK

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.2

60.1

41.9

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

86.6

0.82

0.8

84.6

30.3

Minor 5ss

44.3

-0.6

2.9

59.3

45.5

Minor BPS

52.4

0.07

69.35

42.6

Associated Gene:

Gene:

CDK5RAP1

Ensembl Gene ID:

ENSAPLG00000008506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020747

14925023 - 14933133

8111

ENSAPLT00000008867

14924782 - 14933133

8352

ENSAPLT00000025274

14929007 - 14933304

4298