Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14972458_14972794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14972458 - 14972794

Intron Length:

337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGCT

5'SS Class:

major

3'SS Sequence:

TCTCTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAC

U12 Branch Point Sequence:

TCTCTCCCCACA

Flanking Amino Acid:

ERLQLSLALDSLSQVALVSS

Intron Amino Acid Position:

383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

72.5

37.3

Major BPS

0.22

1.2

52.4

43.3

Major PPT

78.6

0.64

0.7

72.6

25.7

Minor 5ss

38.6

-1.3

3.4

57.4

46.8

Minor BPS

42.6

-0.5

2.1

57.29

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003428

14970120 - 14977622

7503