Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_14984252_14984331_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14984252 - 14984331

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTGCGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAC

U12 Branch Point Sequence:

CGGGCTGCAAAC

Flanking Amino Acid:

TATMAQKITQVGSLYPEDLP

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

71.4

Major BPS

52.2

0.06

1.1

Major PPT

62.8

0.29

1.1

61.4

Minor 5ss

-2.1

3.3

43.8

Minor BPS

-1

2.1

39.76

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045095

14979661 - 14986205

6545

ENSAPLT00000003503

14981099 - 14986205

5107