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Intron Name: Anas_platyrhynchos_platyrhynchos_21_14996277_14996803_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14996277 - 14996803

Intron Length:

527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

ACTTTGTGAACT

Flanking Amino Acid:

GLLNSPTSITGLHLVRVRLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.4

39.5

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

81.9

0.72

0.9

76.3

37.7

Minor 5ss

31.6

-2.1

3.1

31.8

42.6

Minor BPS

52.5

0.16

2.2

74.58

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021261

14987682 - 14998085

10404