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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15038886_15041056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15038886 - 15041056

Intron Length:

2171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

TCATCCCCAGCT

Flanking Amino Acid:

ALTKIEQLCSGAAYCQFMDM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

76.2

0.59

0.9

73.1

31.8

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

47.8

-0

2.1

70.28

45.9

Associated Gene:

Gene:

MAPRE1

Ensembl Gene ID:

ENSAPLG00000027095

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042876

15034587 - 15041917

7331

ENSAPLT00000017897

15033975 - 15041180

7206