Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_15070128_15070773_R

Intron Information:

Intron Rank:

144382

Intron Class:

major

Intron Phase:

Intron Coordinates:

15070128 - 15070773

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTCACCCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CTGCCTTTCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

35.1

Major BPS

81.9

0.79

0.9

80.1

Major PPT

67.9

0.4

0.9

59.8

36.6

Minor 5ss

34.3

-1.8

3.4

50.5

Minor BPS

0.11

1.8

63.04

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024957

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035894

15068618 - 15070886

2269