Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_15074561_15074658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15074561 - 15074658

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAAGAT

U12 Branch Point Sequence:

TTTCTCTCGAGC

Flanking Amino Acid:

LFRFLTEPKEVERFLTQLSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.1

39.5

Major BPS

58.6

0.22

1.1

55.1

40.4

Major PPT

72.8

0.51

70.2

Minor 5ss

33.4

-1.9

3.4

48.4

47.3

Minor BPS

49.6

-0

1.9

67.1

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022122

15073618 - 15078785

5168

ENSAPLT00000004048

15073618 - 15078785

5168