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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15077886_15078397_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15077886 - 15078397

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

AAATCTAAGACT

Flanking Amino Acid:

KGTQMENVYIELTLPQFYSF

Intron Amino Acid Position:

176

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.4

19.4

Major BPS

75.1

0.62

65.6

Major PPT

1.03

0.5

92.7

17.1

Minor 5ss

34.1

-1.8

2.8

39.9

46.1

Minor BPS

46.5

-0.1

1.9

63.81

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022122

15073618 - 15078785

5168

ENSAPLT00000004048

15073618 - 15078785

5168