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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1508564_1513229_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1508564 - 1513229

Intron Length:

4666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GACCCTTTAATT

Flanking Amino Acid:

IYAVAPDDIEGNSKAAPHCP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

64.1

43.4

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

42.8

-0.8

3.2

58.8

46.1

Minor BPS

65.3

0.56

1.3

71.24

39.9

Associated Gene:

Gene:

EYA2

Ensembl Gene ID:

ENSAPLG00000009249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028594

1454257 - 1552764

98508

ENSAPLT00000009703

1454257 - 1545787

91531