Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_15122363_15125517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15122363 - 15125517

Intron Length:

3155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGACCC

5'SS Class:

major

3'SS Sequence:

TTTGTTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

AGGCCATGCAGC

Flanking Amino Acid:

HAGQKKTYRAIAETYAFLPR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

59.9

39.3

Major BPS

58.6

0.22

1.5

38.9

Major PPT

88.6

0.87

0.7

81.3

36.4

Minor 5ss

28.3

-2.5

36.1

40.2

Minor BPS

36.1

-1.1

2.1

41.29

38.1

Associated Gene:

Gene:

NOL4L

Ensembl Gene ID:

ENSAPLG00000004109

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004218

15121740 - 15163273

41534

ENSAPLT00000022327

15121740 - 15149450

27711