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Intron Name: Anas_platyrhynchos_platyrhynchos_21_1513349_1545700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1513349 - 1545700

Intron Length:

32352

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TAATGAATAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.6

1.15

0.7

90.9

28.7

Major BPS

0.82

0.8

24.9

Major PPT

87.7

0.85

0.7

85.6

29.1

Minor 5ss

35.8

-1.6

4.1

57.8

46.8

Minor BPS

44.1

-0.3

2.2

66.19

43.2

Associated Gene:

Gene:

EYA2

Ensembl Gene ID:

ENSAPLG00000009249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009703

1454257 - 1545787

91531