About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_15159572_15159653_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
15159572 - 15159653

Intron Length:
82

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTGAGCGGC

5'SS Class:
major

3'SS Sequence:
TCTGTCTCCTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGAGCAC

U12 Branch Point Sequence:
AGGGCCTGAGCA

Flanking Amino Acid:
RRMKKNGMEMTRPTPPHLTS

Intron Amino Acid Position:
363

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1
59.3
40.2

Major BPS
45.3
-0.2
1.4
51.4
43.9

Major PPT
79.3
0.66
0.8
77
31.7

Minor 5ss
31.4
-2.1
3.3
37.8
42.4

Minor BPS
47.4
-0.2
1.8
55.64
43

Associated Gene:

Gene:
NOL4L

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15121740 - 15163273
41534