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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15204926_15206998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15204926 - 15206998

Intron Length:

2073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CAAAGTTGAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

84.4

0.77

0.8

81.3

30.7

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

-0.2

1.9

59.58

43.4

Associated Gene:

Gene:

PLAGL2

Ensembl Gene ID:

ENSAPLG00000005061

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019337

15204809 - 15211124

6316