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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15227382_15228634_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15227382 - 15228634

Intron Length:

1253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGAAT

5'SS Class:

major

3'SS Sequence:

CAATCTGTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTATATTTAATG

Flanking Amino Acid:

YRLGFMDGNKFYLHNHLSFI

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

39.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

68.9

0.42

0.9

65.8

40.3

Minor 5ss

31.9

-2.1

3.6

47.3

48.3

Minor BPS

0.36

1.5

69.08

38.5

Associated Gene:

Gene:

TM9SF4

Ensembl Gene ID:

ENSAPLG00000005176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005392

15221365 - 15234231

12867