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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15229266_15230771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15229266 - 15230771

Intron Length:

1506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAGGA

5'SS Class:

major

3'SS Sequence:

TTTCTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

ATGGGGATAATC

Flanking Amino Acid:

FHRNDPVEIKAVKLTSSRTQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

62.1

38.7

Major BPS

72.5

0.56

1.2

39.9

Major PPT

86.2

0.81

0.7

30.8

Minor 5ss

-3.1

3.3

29.2

43.4

Minor BPS

38.1

-0.9

2.4

48.83

41.9

Associated Gene:

Gene:

TM9SF4

Ensembl Gene ID:

ENSAPLG00000005176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005392

15221365 - 15234231

12867