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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15243815_15243901_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15243815 - 15243901

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCACCCCAC

5'SS Class:

weak_major

3'SS Sequence:

GCAGCTGAAGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

TGCCCCACAGCA

Flanking Amino Acid:

LDTARVRGHPLPLQTTPEQD

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.5

0.11

1.4

45.6

46.6

Major BPS

58.2

0.2

1.1

49.1

Major PPT

41.4

-0.5

1.7

36.1

39.3

Minor 5ss

32.8

-2

4.2

50.3

46.4

Minor BPS

43.7

-0.4

55.45

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042140

15243290 - 15244720

1431