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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15262986_15264133_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
15262986 - 15264133

Intron Length:
1148

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGAACC

5'SS Class:
strong_major

3'SS Sequence:
TCTTTCTACCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTGAA

U12 Branch Point Sequence:
TTGAACCTAACC

Flanking Amino Acid:
RICHFRNHYELSRKNYLVKN

Intron Amino Acid Position:
127

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.7
0.98
0.8
81.6
30

Major BPS
72
0.55
1.1
63.4
44.3

Major PPT
79.9
0.67
0.8
73.4
36.1

Minor 5ss
34.7
-1.7
2.9
44.4
43.1

Minor BPS
53.8
0.1
1.9
69.32
41.5

Associated Gene:

Gene:
TTLL9

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15254389 - 15264888
10500

15254389 - 15265811
11423

15254389 - 15265052
10664