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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15264246_15264670_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
15264246 - 15264670

Intron Length:
425

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGA|GTAAGCGAG

5'SS Class:
major

3'SS Sequence:
CCTTCCTCCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTGCAT

U12 Branch Point Sequence:
GCTTTCTGCATG

Flanking Amino Acid:
SSRPGWQQAKDEEEWDFLWC

Intron Amino Acid Position:
89

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.2
0.43
1.1
56.9
42.6

Major BPS
62.4
0.31
1.4
73.6
41.8

Major PPT
77.2
0.61
0.7
68.9
31.5

Minor 5ss
37
-1.5
3.3
42.9
45.3

Minor BPS
46.5
-0.4
1.9
52.06
43.1

Associated Gene:

Gene:
TTLL9

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15254389 - 15265052
10664

15254389 - 15265811
11423