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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15264889_15265718_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
15264889 - 15265718

Intron Length:
830

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAAATGT

5'SS Class:
major

3'SS Sequence:
CCTCTCCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTCCT

U12 Branch Point Sequence:
CTCTCCTCTCCG

Flanking Amino Acid:
GGSSVPTCTQAAAPRAPKKP

Intron Amino Acid Position:
32

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.8
0.66
0.9
70.9
35.5

Major BPS
32.7
-1
4.2
69
38.9

Major PPT
75
0.56
0.7
69
24.7

Minor 5ss
33.6
-1.9
3.2
47.6
47.9

Minor BPS
36.4
-1.2
3.6
51.38
48.6

Associated Gene:

Gene:
TTLL9

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15254389 - 15265811
11423