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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_21_15292773_15292863_R

Intron Information:

Intron Rank:
7
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
15292773 - 15292863
Intron Length:
91

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTGCCGTGC
5'SS Class:
major
3'SS Sequence:
GTCCCGGCCACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CTCTGAA
U12 Branch Point Sequence:
TGCCTCTGAACC
Flanking Amino Acid:
VKIIDFGLARRYNPQEKLKV
Intron Amino Acid Position:
777

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
61.2
0.26
1.2
52
42
Major BPS
69.8
0.49
1
61
37.5
Major PPT
60.9
0.25
1
52.5
36.8
Minor 5ss
36.1
-1.6
3.5
50.3
46.3
Minor BPS
59
0.26
1.5
65.34
39.8

Associated Gene:

Gene:
MYLK2
Ensembl Gene ID:
ENSAPLG00000019376
Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000024215
15290847 - 15296659
5813