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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15295071_15295187_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
15295071 - 15295187

Intron Length:
117

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACCCGGG

5'SS Class:
major

3'SS Sequence:
CTCCTGCTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTCAC

U12 Branch Point Sequence:
CACTGCTCACCT

Flanking Amino Acid:
QSLSCPAACQREEQPGLEVA

Intron Amino Acid Position:
491

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.2
0.31
1.3
49.1
47.6

Major BPS
69.8
0.49
1.1
71.3
36.7

Major PPT
77.8
0.63
0.8
68.5
37.3

Minor 5ss
40.2
-1.1
3.5
56
48.2

Minor BPS
44.6
-0.3
2.2
60.78
48.5

Associated Gene:

Gene:
MYLK2

Ensembl Gene ID:

Chromosome:
21

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15290847 - 15296659
5813