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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15302868_15303267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15302868 - 15303267

Intron Length:

400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

ATTTGTTTCATT

Flanking Amino Acid:

EEVAKLRQELVHKANPIRRY

Intron Amino Acid Position:

734

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

41.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

80.1

0.68

0.9

72.8

42.2

Minor 5ss

35.8

-1.6

3.3

43.3

45.4

Minor BPS

52.7

0.17

2.1

77.48

Associated Gene:

Gene:

TPX2

Ensembl Gene ID:

ENSAPLG00000010382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010870

15302757 - 15310458

7702

ENSAPLT00000023642

15302757 - 15312456

9700