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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15310459_15312089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15310459 - 15312089

Intron Length:

1631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TCGTTCTCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TTTGCTGTAGCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

0.28

1.1

63.1

35.8

Major PPT

70.9

0.47

71.8

33.1

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

-0

2.3

70.6

42.3

Associated Gene:

Gene:

TPX2

Ensembl Gene ID:

ENSAPLG00000010382

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023642

15302757 - 15312456

9700