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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15330739_15334145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

15330739 - 15334145

Intron Length:

3407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTAC

5'SS Class:

strong_major

3'SS Sequence:

CTGGTGTTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TCTAATGGAATT

Flanking Amino Acid:

KASSRSSPARREPYAYGDGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.4

33.3

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

76.3

0.59

72.6

42.4

Minor 5ss

36.4

-1.5

3.4

49.2

47.3

Minor BPS

42.6

-0.4

2.1

62.05

42.4

Associated Gene:

Gene:

NCOA5

Ensembl Gene ID:

ENSAPLG00000013733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014316

15323805 - 15338889

15085