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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15334545_15338040_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15334545 - 15338040

Intron Length:

3496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

GTTTTCAGACTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

0.65

1.5

85.7

34.9

Major PPT

83.2

0.75

0.7

77.2

31.6

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

45.8

-0.3

1.9

60.52

38.7

Associated Gene:

Gene:

NCOA5

Ensembl Gene ID:

ENSAPLG00000013733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014316

15323805 - 15338889

15085