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Intron Name: Anas_platyrhynchos_platyrhynchos_21_15338149_15338702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

15338149 - 15338702

Intron Length:

554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTAGTATT

5'SS Class:

major

3'SS Sequence:

TTAACTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

TTCCTTGTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.2

36.1

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

81.7

0.71

0.9

73.4

41.6

Minor 5ss

37.6

-1.4

2.7

45.2

42.4

Minor BPS

54.7

0.22

76.22

Associated Gene:

Gene:

NCOA5

Ensembl Gene ID:

ENSAPLG00000013733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014316

15323805 - 15338889

15085